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- rs200827730[chr2:220670500]
Enhancers that have rs200827730[chr2:220670500]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
220666105 |
220670941 |
enh86390 |
|
|
Transcript factors that have rs200827730[chr2:220670500]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
220670493
|
220670503
|
HOXA13
|
JASPAR
|
yes
|
|
81058201
|
|
|
chr2
|
220670493
|
220670503
|
HOXB13
|
JASPAR
|
yes
|
|
81058202
|
|
|
chr2
|
220670493
|
220670503
|
HOXD13
|
JASPAR
|
yes
|
|
81058203
|
|
|
chr2
|
220670493
|
220670504
|
HOXA10
|
JASPAR
|
yes
|
|
81058204
|
|
|
chr2
|
220670494
|
220670503
|
CDX1
|
JASPAR
|
yes
|
|
81058205
|
|
|
chr2
|
220670494
|
220670505
|
CDX2
|
JASPAR
|
yes
|
|
81058206
|
|
|
chr2
|
220670499
|
220670520
|
IRF1
|
JASPAR
|
yes
|
|
81058207
|
|
|
chr2
|
220670500
|
220670521
|
IRF1
|
JASPAR
|
yes
|
|
81058208
|
|
Genes associated with rs200827730[chr2:220670500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |