EnhancerDB
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  3. rs200959376[chr12:54553029]
Enhancers that have rs200959376[chr12:54553029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54550923 54557695 enh2374
Bone Marrow (K562) Brain (SK-N-SH) Large Intestine Ovary Blood (Karpas-422) Kidney
Transcript factors that have rs200959376[chr12:54553029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54552937 54553241 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550232
chr12 54552990 54553226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550233
chr12 54552993 54553317 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550234
chr12 54552994 54553264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550235
chr12 54552995 54553239 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550236
chr12 54553007 54553324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550237
chr12 54553017 54553038 ZNF263 JASPAR yes 121026955
chr12 54553018 54553288 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550238
chr12 54553026 54553036 ALX3 JASPAR yes 121026956
chr12 54553026 54553036 EMX1 JASPAR yes 121026957
chr12 54553026 54553036 EMX2 JASPAR yes 121026958
chr12 54553026 54553036 EN2 JASPAR yes 121026959
chr12 54553026 54553036 ESX1 JASPAR yes 121026960
chr12 54553026 54553036 EVX1 JASPAR yes 121026961
chr12 54553026 54553036 EVX2 JASPAR yes 121026962
chr12 54553026 54553036 GBX1 JASPAR yes 121026963
chr12 54553026 54553036 GBX2 JASPAR yes 121026964
chr12 54553026 54553036 GSX1 JASPAR yes 121026965
chr12 54553026 54553036 HOXA2 JASPAR yes 121026966
chr12 54553026 54553036 HOXB2 JASPAR yes 121026967
chr12 54553026 54553036 HOXB3 JASPAR yes 121026968
chr12 54553026 54553036 LHX2 JASPAR yes 121026969
chr12 54553026 54553036 LHX6 JASPAR yes 121026970
chr12 54553026 54553036 MEOX1 JASPAR yes 121026971
chr12 54553026 54553036 MEOX2 JASPAR yes 121026972
chr12 54553026 54553036 NOTO JASPAR yes 121026973
chr12 54553027 54553035 DLX6 JASPAR yes 121026974
chr12 54553027 54553035 EN1 JASPAR yes 121026975
chr12 54553027 54553035 LBX1 JASPAR yes 121026976
chr12 54553027 54553035 PAX4 JASPAR yes 121026977
chr12 54553027 54553035 PDX1 JASPAR yes 121026978
chr12 54553027 54553035 VAX1 JASPAR yes 121026979
chr12 54553027 54553035 VAX2 JASPAR yes 121026980
chr12 54553027 54553035 VSX1 JASPAR yes 121026981
chr12 54553027 54553035 VSX2 JASPAR yes 121026982
chr12 54553027 54553037 POU6F2 JASPAR yes 121026983
Genes associated with rs200959376[chr12:54553029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More