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- rs2010242[chr12:54198588]
Enhancers that have rs2010242[chr12:54198588]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
54186005 |
54202829 |
enh80200 |
|
|
Transcript factors that have rs2010242[chr12:54198588]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
54198060
|
54198716
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21549802
|
|
|
chr12
|
54198072
|
54198642
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21549803
|
|
|
chr12
|
54198403
|
54198593
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
21549806
|
|
|
chr12
|
54198412
|
54198636
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21549807
|
|
|
chr12
|
54198433
|
54198663
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21549808
|
|
|
chr12
|
54198586
|
54198590
|
YY1
|
TRANSFAC
|
yes
|
|
121009828
|
|
|
chr12
|
54198588
|
54198609
|
ZNF263
|
JASPAR
|
yes
|
|
121009829
|
|
Genes associated with rs2010242[chr12:54198588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
54388679
|
54397121
|
+
|
HOXC9
|
ENSG00000180806.4
|
54388679
|
190091
|
Pancreas
|
0.228761
|
12139
|
|