EnhancerDB
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  3. rs201387343[chr10:25176399]
Enhancers that have rs201387343[chr10:25176399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs201387343[chr10:25176399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 21422373
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 107904402
chr10 25174218 25177043 TCF7L2 GTRD no Colon (HCT116) 21422374
chr10 25174218 25177043 TCF7L2 GTRD no Colon (HCT116) 107904403
chr10 25176047 25176952 TCF7L2 GTRD no Colon (HCT116) 21422375
chr10 25176047 25176952 TCF7L2 GTRD no Colon (HCT116) 107904404
chr10 25176201 25176774 ZNF274 GTRD no Blood (GM12878) 21422376
chr10 25176201 25176774 ZNF274 GTRD no Blood (GM12878) 107904405
chr10 25176279 25176969 TCF7L2 GTRD no Colon (HCT116) 21422377
chr10 25176279 25176969 TCF7L2 GTRD no Colon (HCT116) 107904406
chr10 25176329 25176742 TCF7L2 GTRD no Colon (HCT116) 21422378
chr10 25176329 25176742 TCF7L2 GTRD no Colon (HCT116) 107904407
chr10 25176343 25176958 ZNF143 GTRD no Epithelial (MCF-7) 21422379
chr10 25176343 25176958 ZNF143 GTRD no Epithelial (MCF-7) 107904408
chr10 25176349 25176991 ZNF143 GTRD no Epithelial (MCF-7) 21422380
chr10 25176349 25176991 ZNF143 GTRD no Epithelial (MCF-7) 107904409
chr10 25176355 25176940 ZNF143 GTRD no Epithelial (MCF-7) 21422381
chr10 25176355 25176940 ZNF143 GTRD no Epithelial (MCF-7) 107904410
chr10 25176356 25176852 ZNF143 GTRD no Epithelial (MCF-7) 21422382
chr10 25176356 25176852 ZNF143 GTRD no Epithelial (MCF-7) 107904411
chr10 25176362 25177099 TCF7L2 GTRD no Colon (HCT116) 21422383
chr10 25176362 25177099 TCF7L2 GTRD no Colon (HCT116) 107904412
chr10 25176383 25176824 ZNF143 GTRD no Epithelial (MCF-7) 21422384
chr10 25176383 25176824 ZNF143 GTRD no Epithelial (MCF-7) 107904413
chr10 25176394 25176404 SP1 JASPAR yes 126101057
chr10 25176395 25176405 SP1 JASPAR yes 126101058
chr10 25176397 25176418 ZNF263 JASPAR yes 126101059
Genes associated with rs201387343[chr10:25176399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More