EnhancerDB
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  3. rs201406898[chr19:6354193]
Enhancers that have rs201406898[chr19:6354193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6350085 6356315 enh17890
Placenta Epithelial (MCF-7)
Transcript factors that have rs201406898[chr19:6354193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6353865 6354776 ZNF143 GTRD no Epithelial (MCF-7) 21845175
chr19 6353880 6354526 ZNF143 GTRD no Epithelial (MCF-7) 21845176
chr19 6353991 6354409 ZNF143 GTRD no Epithelial (MCF-7) 21845177
chr19 6354035 6354460 ZNF143 GTRD no Epithelial (MCF-7) 21845178
chr19 6354049 6354475 ZNF143 GTRD no Epithelial (MCF-7) 21845179
chr19 6354058 6354453 ZNF143 GTRD no Epithelial (MCF-7) 21845180
chr19 6354071 6354425 ZNF143 GTRD no Epithelial (MCF-7) 21845181
chr19 6354077 6354414 ZNF143 GTRD no Epithelial (MCF-7) 21845182
chr19 6354167 6354430 ZNF143 GTRD no Epithelial (MCF-7) 21845183
chr19 6354179 6354438 ZNF143 GTRD no Epithelial (MCF-7) 21845184
chr19 6354187 6354202 MEF2C JASPAR yes 112268290
chr19 6354188 6354203 MEF2A JASPAR yes 112268291
chr19 6354192 6354213 IRF1 JASPAR yes 112268292
Genes associated with rs201406898[chr19:6354193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More