EnhancerDB
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  3. rs201532720[chr12:54219646]
Enhancers that have rs201532720[chr12:54219646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs201532720[chr12:54219646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54219172 54219742 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21550018
chr12 54219218 54219688 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21550021
chr12 54219637 54219649 YY1 JASPAR yes 121011554
chr12 54219643 54219659 POU4F2 JASPAR yes 121011555
chr12 54219643 54219659 POU4F3 JASPAR yes 121011556
chr12 54219644 54219659 FOXA1 JASPAR yes 121011557
chr12 54219645 54219657 FOXI1 JASPAR yes 121011558
chr12 54219645 54219659 POU4F1 JASPAR yes 121011559
chr12 54219645 54219660 FOXP1 JASPAR yes 121011560
chr12 54219645 54219660 HNF1A JASPAR yes 121011561
chr12 54219646 54219658 FOXC2 JASPAR yes 121011562
chr12 54219646 54219660 ONECUT2 JASPAR yes 121011563
chr12 54219646 54219660 ONECUT3 JASPAR yes 121011564
Genes associated with rs201532720[chr12:54219646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More