EnhancerDB
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  3. rs202028937[chr1:172531481]
Enhancers that have rs202028937[chr1:172531481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172528405 172534835 enh729
Astrocyte Prostate (PC-3) Blood (Karpas-422)
Transcript factors that have rs202028937[chr1:172531481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172531460 172531481 IRF1 JASPAR yes 33137785
chr1 172531462 172531483 IRF1 JASPAR yes 33137787
chr1 172531464 172531485 IRF1 JASPAR yes 33137788
chr1 172531465 172531486 IRF1 JASPAR yes 33137791
chr1 172531466 172531481 FOXP1 JASPAR yes 33137792
chr1 172531466 172531487 IRF1 JASPAR yes 33137793
chr1 172531467 172531482 FOXP1 JASPAR yes 33137794
chr1 172531467 172531488 IRF1 JASPAR yes 33137795
chr1 172531468 172531483 FOXP1 JASPAR yes 33137796
chr1 172531468 172531489 IRF1 JASPAR yes 33137797
chr1 172531469 172531484 FOXP1 JASPAR yes 33137798
chr1 172531469 172531490 IRF1 JASPAR yes 33137799
chr1 172531470 172531485 FOXP1 JASPAR yes 33137800
chr1 172531470 172531491 IRF1 JASPAR yes 33137801
chr1 172531471 172531486 FOXP1 JASPAR yes 33137802
chr1 172531471 172531492 IRF1 JASPAR yes 33137803
chr1 172531472 172531487 FOXP1 JASPAR yes 33137804
chr1 172531473 172531488 FOXP1 JASPAR yes 33137805
chr1 172531474 172531489 FOXP1 JASPAR yes 33137806
chr1 172531475 172531490 FOXP1 JASPAR yes 33137807
chr1 172531476 172531491 FOXP1 JASPAR yes 33137808
chr1 172531477 172531492 FOXP1 JASPAR yes 33137809
chr1 172531477 172531492 MEF2C JASPAR yes 33137810
chr1 172531479 172531494 FOXP1 JASPAR yes 33137811
Genes associated with rs202028937[chr1:172531481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More