EnhancerDB
  1. Home
  2. SNP
  3. rs2141079[chr1:54120873]
Enhancers that have rs2141079[chr1:54120873]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54117309 54125068 enh26711
Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs2141079[chr1:54120873]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54120864 54120874 TBR1 JASPAR yes 28944411
chr1 54120864 54120875 TBX2 JASPAR yes 28944412
chr1 54120866 54120875 ZEB1 JASPAR yes 28944413
chr1 54120867 54120877 SREBF1 JASPAR yes 28944414
chr1 54120867 54120877 SREBF2 JASPAR yes 28944415
chr1 54120869 54120874 USF2 TRANSFAC yes 28944416
chr1 54120871 54120882 TBX2 JASPAR yes 28944417
chr1 54120873 54120881 TBX15 JASPAR yes 28944418
chr1 54120873 54120881 TBX1 JASPAR yes 28944419
chr1 54120873 54120881 TBX4 JASPAR yes 28944420
chr1 54120873 54120881 TBX5 JASPAR yes 28944421
Genes associated with rs2141079[chr1:54120873], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More