EnhancerDB
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  3. rs2148270[chr10:25182708]
Enhancers that have rs2148270[chr10:25182708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2148270[chr10:25182708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25182702 25182710 HOXA5 JASPAR yes 126102013
chr10 25182703 25182713 EN2 JASPAR yes 126102014
chr10 25182703 25182713 GBX1 JASPAR yes 126102015
chr10 25182704 25182712 BSX JASPAR yes 126102016
chr10 25182704 25182712 DLX6 JASPAR yes 126102017
chr10 25182704 25182712 MSX1 JASPAR yes 126102018
chr10 25182704 25182712 MSX2 JASPAR yes 126102019
chr10 25182708 25182714 NFIC JASPAR yes 126102020
Genes associated with rs2148270[chr10:25182708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More