EnhancerDB
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  3. rs2235654[chr1:20093326]
Enhancers that have rs2235654[chr1:20093326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20081105 20095655 enh26567
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube)
Transcript factors that have rs2235654[chr1:20093326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20093317 20093329 PKNOX1 JASPAR yes 27216326
chr1 20093317 20093329 PKNOX2 JASPAR yes 27216327
chr1 20093317 20093329 TGIF1 JASPAR yes 27216328
chr1 20093317 20093329 TGIF2 JASPAR yes 27216329
chr1 20093325 20093336 NRL JASPAR yes 27216330
Genes associated with rs2235654[chr1:20093326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More