EnhancerDB
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Enhancers that have rs2250985[chr19:5339978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
Transcript factors that have rs2250985[chr19:5339978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5337953 5341628 ZNF274 GTRD no Bone Marrow (K562) 108375046
chr19 5337953 5341628 ZNF274 GTRD no Bone Marrow (K562) 108375047
chr19 5337974 5341515 TCF7L2 GTRD no Colon (HCT116) 108375048
chr19 5337974 5341515 TCF7L2 GTRD no Colon (HCT116) 108375049
chr19 5338089 5341363 TCF7L2 GTRD no Colon (HCT116) 108375051
chr19 5338089 5341363 TCF7L2 GTRD no Colon (HCT116) 108375052
chr19 5338354 5341561 TCF7L2 GTRD no Colon (HCT116) 108375055
chr19 5338354 5341561 TCF7L2 GTRD no Colon (HCT116) 108375056
chr19 5338701 5340038 ZNF274 GTRD no Blood (GM12878) 108375069
chr19 5338701 5340038 ZNF274 GTRD no Blood (GM12878) 108375070
chr19 5338869 5341615 TCF7L2 GTRD no Colon (HCT116) 108375083
chr19 5339057 5341358 TCF7L2 GTRD no Colon (HCT116) 108375084
chr19 5339279 5340002 ZNF274 GTRD no Blood (GM12878) 108375088
chr19 5339314 5341382 ZNF274 GTRD no Bone Marrow (K562) 108375089
chr19 5339334 5341205 TCF7L2 GTRD no Colon (HCT116) 108375090
chr19 5339370 5341338 ZNF274 GTRD no Bone Marrow (K562) 108375091
chr19 5339383 5340298 ZNF274 GTRD no Liver (HepG2) 108375092
chr19 5339393 5341363 ZNF274 GTRD no Liver (HepG2) 108375093
chr19 5339402 5341558 TCF7L2 GTRD no Colon (HCT116) 108375094
chr19 5339408 5340024 ZNF274 GTRD no Liver (HepG2) 108375095
chr19 5339421 5341625 ZBTB33 GTRD no Lung (A549) 108375096
chr19 5339427 5341369 TCF7L2 GTRD no Colon (HCT116) 108375097
chr19 5339428 5340534 ZNF143 GTRD no Epithelial (MCF-7) 108375098
chr19 5339429 5340031 ZNF274 GTRD no Bone Marrow (K562) 108375099
chr19 5339436 5340042 ZBTB33 GTRD no Lung (A549) 108375100
chr19 5339437 5341360 ZNF274 GTRD no Bone Marrow (K562) 108375101
chr19 5339443 5341782 ZNF274 GTRD no Bone Marrow (K562) 108375102
chr19 5339454 5341401 ZNF274 GTRD no Liver (HepG2) 108375103
chr19 5339454 5341405 ZNF274 GTRD no Liver (HepG2) 108375104
chr19 5339460 5340023 ZNF274 GTRD no Blood (GM12878) 108375105
chr19 5339465 5340472 ZNF274 GTRD no Liver (HepG2) 108375106
chr19 5339466 5340050 ZNF274 GTRD no Blood (GM12878) 108375107
chr19 5339467 5341340 TCF7L2 GTRD no Colon (HCT116) 108375108
chr19 5339501 5340088 ZNF274 GTRD no Blood (GM12878) 108375109
chr19 5339533 5340640 ZNF274 GTRD no Liver (HepG2) 108375110
chr19 5339553 5341651 ZBTB33 GTRD no Lung (A549) 108375113
chr19 5339556 5340079 ZNF274 GTRD no Liver (HepG2) 108375114
chr19 5339560 5341302 ZNF143 GTRD no Epithelial (MCF-7) 108375115
chr19 5339562 5341343 ZNF274 GTRD no Liver (HepG2) 108375116
chr19 5339564 5341325 TCF7L2 GTRD no Colon (HCT116) 108375117
chr19 5339584 5341458 ZNF143 GTRD no Epithelial (MCF-7) 108375120
chr19 5339588 5340818 ZNF143 GTRD no Epithelial (MCF-7) 108375123
chr19 5339594 5341544 ZNF274 GTRD no Liver (HepG2) 108375124
chr19 5339626 5341249 TCF7L2 GTRD no Colon (HCT116) 108375129
chr19 5339635 5340019 ZBTB33 GTRD no Brain (SK-N-SH) 108375130
chr19 5339657 5340934 ZNF143 GTRD no Epithelial (MCF-7) 108375132
chr19 5339675 5340243 ZNF274 GTRD no Bone Marrow (K562) 108375136
chr19 5339722 5341648 ZNF274 GTRD no Bone Marrow (K562) 108375138
chr19 5339739 5340332 ZBTB33 GTRD no Lung (A549) 108375139
chr19 5339741 5340495 ZNF274 GTRD no Bone Marrow (K562) 108375140
chr19 5339789 5340694 ZNF274 GTRD no Bone Marrow (K562) 108375141
Genes associated with rs2250985[chr19:5339978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More