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- rs2283476[chr16:2039308]
Enhancers that have rs2283476[chr16:2039308]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2037445 |
2041755 |
enh107660 |
|
|
Transcript factors that have rs2283476[chr16:2039308]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2034667
|
2041788
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172046
|
|
|
chr16
|
2036087
|
2041476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108172047
|
|
|
chr16
|
2038418
|
2041497
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172048
|
|
|
chr16
|
2038422
|
2041467
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172049
|
|
|
chr16
|
2038424
|
2041536
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172050
|
|
|
chr16
|
2038555
|
2041539
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172051
|
|
|
chr16
|
2038626
|
2041574
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172052
|
|
|
chr16
|
2038970
|
2041432
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172053
|
|
|
chr16
|
2038975
|
2041520
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172054
|
|
|
chr16
|
2039298
|
2039313
|
NR2C2
|
JASPAR
|
yes
|
|
9167584
|
|
|
chr16
|
2039303
|
2041484
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108172055
|
|
Genes associated with rs2283476[chr16:2039308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
2034208
|
2037750
|
+
|
GFER
|
ENSG00000127554.12
|
2034208
|
1558
|
Pancreas
|
0.228629
|
14417
|
|
|
chr16
|
2047655
|
2059824
|
-
|
ZNF598
|
ENSG00000167962.8
|
2059824
|
8347
|
Adrenal
|
0.00974227
|
14419
|
|