Enhancers that have rs239983[chr1:201709880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201709797 201710423 vista4575

Transcript factors that have rs239983[chr1:201709880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201707856 201710208 ZNF143 GTRD no Epithelial (MCF-7) 21365284
chr1 201707856 201710208 ZNF143 GTRD no Epithelial (MCF-7) 107856978
chr1 201707976 201710210 ZNF143 GTRD no Epithelial (MCF-7) 21365285
chr1 201707976 201710210 ZNF143 GTRD no Epithelial (MCF-7) 107856979
chr1 201708125 201710157 ZNF143 GTRD no Epithelial (MCF-7) 21365286
chr1 201708125 201710157 ZNF143 GTRD no Epithelial (MCF-7) 107856980
chr1 201708568 201710125 ZBTB33 GTRD no Lung (A549) 107856981
chr1 201708851 201710379 ZNF274 GTRD no Bone Marrow (K562) 107856982
chr1 201708860 201710195 ZNF143 GTRD no Epithelial (MCF-7) 107856983
chr1 201708862 201710379 ZNF274 GTRD no Bone Marrow (K562) 107856984
chr1 201708895 201710350 ZBTB33 GTRD no Lung (A549) 21365287
chr1 201708895 201710350 ZBTB33 GTRD no Lung (A549) 107856985
chr1 201708898 201710356 ZNF274 GTRD no Cervix (HeLa-S3) 21365288
chr1 201708898 201710356 ZNF274 GTRD no Cervix (HeLa-S3) 107856986
chr1 201708946 201710050 ZNF274 GTRD no Bone Marrow (K562) 107856987
chr1 201709036 201710177 ZNF274 GTRD no Bone Marrow (K562) 107856988
chr1 201709057 201710193 ZNF143 GTRD no Epithelial (MCF-7) 107856989
chr1 201709070 201710309 ZBTB33 GTRD no Lung (A549) 21365289
chr1 201709070 201710309 ZBTB33 GTRD no Lung (A549) 107856990
chr1 201709073 201710093 ZNF274 GTRD no Blood (GM12878) 107856991
chr1 201709079 201710211 ZNF274 GTRD no Blood (GM12878) 107856992
chr1 201709087 201710018 ZNF274 GTRD no Bone Marrow (K562) 107856993
chr1 201709094 201710017 ZNF274 GTRD no Blood (GM12878) 107856994
chr1 201709144 201710210 ZNF143 GTRD no Epithelial (MCF-7) 107856995
chr1 201709149 201711054 ZBTB33 GTRD no Lung (A549) 21365290
chr1 201709149 201711054 ZBTB33 GTRD no Lung (A549) 107856996
chr1 201709162 201710179 CTCF GTRD no Spleen 107856997
chr1 201709166 201710253 ZBTB33 GTRD no Lung (A549) 107856998
chr1 201709167 201709982 ZNF274 GTRD no Bone Marrow (K562) 107856999
chr1 201709201 201710149 ZNF274 GTRD no Bone Marrow (K562) 107857000
chr1 201709203 201709945 ZNF274 GTRD no Liver (HepG2) 107857001
chr1 201709209 201709919 CTCF GTRD no Kidney 107857002
chr1 201709237 201710224 ZBTB33 GTRD no Lung (A549) 107857003
chr1 201709252 201710291 ZBTB33 GTRD no Lung (A549) 107857004
chr1 201709257 201710031 ZBTB33 GTRD no Lung (A549) 107857005
chr1 201709264 201710092 ZNF143 GTRD no Epithelial (MCF-7) 107857006
chr1 201709274 201710024 ZBTB33 GTRD no Lung (A549) 107857007
chr1 201709282 201709914 ZNF274 GTRD no Liver (HepG2) 107857008
chr1 201709301 201710058 ZBTB33 GTRD no Lung (A549) 107857009
chr1 201709304 201709975 CTCF GTRD no Lung 107857010
chr1 201709305 201710178 ZBTB33 GTRD no Lung (A549) 107857011
chr1 201709322 201710016 ZNF274 GTRD no Bone Marrow (K562) 107857012
chr1 201709326 201709919 ZNF143 GTRD no Epithelial (MCF-7) 107857013
chr1 201709328 201710009 ZNF143 GTRD no Epithelial (MCF-7) 107857014
chr1 201709333 201710035 ZNF274 GTRD no Blood (GM12878) 107857015
chr1 201709346 201710125 ZNF274 GTRD no Blood (GM12878) 107857016
chr1 201709353 201710091 ZNF274 GTRD no Blood (GM12878) 107857017
chr1 201709358 201710272 ZNF143 GTRD no Epithelial (MCF-7) 107857018
chr1 201709361 201710147 ZNF274 GTRD no Bone Marrow (K562) 107857019
chr1 201709363 201710011 TCF7L2 GTRD no Colon (HCT116) 107857020
chr1 201709364 201710070 ZNF143 GTRD no Epithelial (MCF-7) 107857021
chr1 201709367 201709942 TCF7L2 GTRD no Colon (HCT116) 107857022
chr1 201709377 201709980 ZBTB33 GTRD no Lung (A549) 107857025
chr1 201709382 201710033 ZNF143 GTRD no Epithelial (MCF-7) 107857026
chr1 201709384 201710078 ZBTB33 GTRD no Lung (A549) 107857027
chr1 201709385 201710043 ZBTB33 GTRD no Lung (A549) 107857028
chr1 201709385 201710099 ZNF274 GTRD no Blood (GM12878) 107857029
chr1 201709393 201709916 ZNF274 GTRD no Blood (GM12878) 107857030
chr1 201709395 201709900 TCF7L2 GTRD no Colon (HCT116) 107857031
chr1 201709400 201710130 ZNF274 GTRD no Bone Marrow (K562) 107857033
chr1 201709400 201710211 ZNF274 GTRD no Bone Marrow (K562) 107857034
chr1 201709405 201710030 ZNF143 GTRD no Epithelial (MCF-7) 107857035
chr1 201709413 201710024 ZNF274 GTRD no Bone Marrow (K562) 107857036
chr1 201709419 201709934 ZNF274 GTRD no Liver (HepG2) 107857038
chr1 201709420 201710083 ZBTB33 GTRD no Lung (A549) 107857039
chr1 201709421 201710169 ZBTB33 GTRD no Brain (SK-N-SH) 107857040
chr1 201709424 201710004 ZNF274 GTRD no Cervix (HeLa-S3) 107857041
chr1 201709437 201709993 ZNF274 GTRD no Bone Marrow (K562) 107857042
chr1 201709444 201709902 ZNF274 GTRD no Bone Marrow (K562) 107857043
chr1 201709465 201709913 ZNF274 GTRD no Bone Marrow (K562) 107857045
chr1 201709484 201709940 ZNF274 GTRD no Blood (GM12878) 107857046
chr1 201709490 201709882 ZNF274 GTRD no Liver (HepG2) 107857047
chr1 201709492 201709928 ZNF274 GTRD no Cervix (HeLa-S3) 107857048
chr1 201709499 201709999 ZNF274 GTRD no Liver (HepG2) 107857049
chr1 201709529 201709932 ZNF274 GTRD no Cervix (HeLa-S3) 107857051
chr1 201709545 201709941 ZNF274 GTRD no Blood (GM12878) 107857053
chr1 201709553 201710073 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107857054
chr1 201709655 201710039 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857057
chr1 201709693 201710388 ZBTB33 GTRD no Brain (SK-N-SH) 107857058
chr1 201709827 201710020 SPI1 UCSC Txn Factor no Conserved 107857059
chr1 201709827 201710020 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107857060
chr1 201709843 201710012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857061
chr1 201709851 201710127 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107857062

Genes associated with rs239983[chr1:201709880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More