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- rs2450849[chr12:55352513]
Enhancers that have rs2450849[chr12:55352513]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
55347165 |
55354166 |
enh2380 |
|
|
Transcript factors that have rs2450849[chr12:55352513]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
55352507
|
55352519
|
IRF1
|
JASPAR
|
yes
|
|
121062851
|
|
|
chr12
|
55352507
|
55352521
|
IRF7
|
JASPAR
|
yes
|
|
121062852
|
|
|
chr12
|
55352507
|
55352522
|
IRF9
|
JASPAR
|
yes
|
|
121062853
|
|
Genes associated with rs2450849[chr12:55352513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
54388679
|
54397121
|
+
|
HOXC9
|
ENSG00000180806.4
|
54388679
|
955392
|
Esophagus
|
0.299296
|
12139
|
|