EnhancerDB
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  3. rs2454165[chr1:17488709]
Enhancers that have rs2454165[chr1:17488709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17485905 17499477 enh11553
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2454165[chr1:17488709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17488702 17488713 USF1 JASPAR yes 27073144
chr1 17488702 17488713 USF2 JASPAR yes 27073145
chr1 17488703 17488713 MAX JASPAR yes 27073146
chr1 17488708 17488718 RUNX3 JASPAR yes 27073147
chr1 17488708 17488719 RUNX1 JASPAR yes 27073148
Genes associated with rs2454165[chr1:17488709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More