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- rs2454200[chr1:179729643]
Enhancers that have rs2454200[chr1:179729643]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
179728475 |
179733615 |
enh101149 |
|
|
Transcript factors that have rs2454200[chr1:179729643]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
179729638
|
179729648
|
HMBOX1
|
JASPAR
|
yes
|
|
33488693
|
|
|
chr1
|
179729640
|
179729643
|
MYB
|
TRANSFAC
|
yes
|
|
33488694
|
|
Genes associated with rs2454200[chr1:179729643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
178994939
|
179045697
|
+
|
FAM20B
|
ENSG00000116199.7
|
178994939
|
683946
|
Stomach
|
0.392256
|
1604
|
|