EnhancerDB
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  3. rs2540459[chr12:96469088]
Enhancers that have rs2540459[chr12:96469088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96462449 96479275 enh14920
Esophagus Placenta Lung (PC-9) Heart Epithelial (MCF-7)
Transcript factors that have rs2540459[chr12:96469088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96469068 96469089 IRF1 JASPAR yes 123035220
chr12 96469078 96469093 HSF1 JASPAR yes 123035226
chr12 96469079 96469092 HSF1 JASPAR yes 123035227
chr12 96469079 96469092 HSF2 JASPAR yes 123035228
chr12 96469079 96469092 HSF4 JASPAR yes 123035229
chr12 96469081 96469091 ELK1 JASPAR yes 123035230
chr12 96469081 96469091 ELK3 JASPAR yes 123035231
chr12 96469081 96469091 ERG JASPAR yes 123035232
chr12 96469081 96469091 ETS1 JASPAR yes 123035233
chr12 96469081 96469091 ETV1 JASPAR yes 123035234
chr12 96469081 96469091 ETV3 JASPAR yes 123035235
chr12 96469081 96469091 ETV4 JASPAR yes 123035236
chr12 96469081 96469091 ETV5 JASPAR yes 123035237
chr12 96469081 96469091 ETV6 JASPAR yes 123035238
chr12 96469081 96469091 FEV JASPAR yes 123035239
chr12 96469081 96469091 FLI1 JASPAR yes 123035240
chr12 96469081 96469093 ELF1 JASPAR yes 123035241
chr12 96469081 96469093 ELF4 JASPAR yes 123035242
chr12 96469082 96469090 FEV JASPAR yes 123035243
chr12 96469082 96469091 ELK4 JASPAR yes 123035244
chr12 96469083 96469089 ETS1 JASPAR yes 123035245
chr12 96469083 96469089 SPI1 JASPAR yes 123035246
chr12 96469083 96469093 ELK1 JASPAR yes 123035247
chr12 96469088 96469106 NR3C1 JASPAR yes 123035248
Genes associated with rs2540459[chr12:96469088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More