EnhancerDB
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  3. rs2547433[chr19:6576142]
Enhancers that have rs2547433[chr19:6576142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs2547433[chr19:6576142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575515 6578247 ZNF274 GTRD no Bone Marrow (K562) 21845802
chr19 6575515 6578247 ZNF274 GTRD no Bone Marrow (K562) 108378567
chr19 6575698 6579375 ZNF274 GTRD no Blood (GM12878) 108378568
chr19 6575808 6579342 ZNF274 GTRD no Blood (GM12878) 108378569
chr19 6575965 6578171 P63 GTRD no Skin (Keratinocyte) 108378570
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6575993 6579348 ZNF274 GTRD no Blood (GM12878) 108378573
chr19 6576056 6576841 ZNF274 GTRD no Bone Marrow (K562) 21845804
chr19 6576125 6576146 IRF1 JASPAR yes 112277492
chr19 6576129 6576143 IRF7 JASPAR yes 112277493
chr19 6576138 6576154 SOX4 JASPAR yes 112277494
chr19 6576138 6576159 IRF1 JASPAR yes 112277495
chr19 6576141 6576145 YY1 TRANSFAC yes 112277496
Genes associated with rs2547433[chr19:6576142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More