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- rs2549194[chr16:1047385]
Enhancers that have rs2549194[chr16:1047385]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1045545 |
1050015 |
enh88212 |
|
|
Transcript factors that have rs2549194[chr16:1047385]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1043552
|
1049740
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170980
|
|
|
chr16
|
1043594
|
1047476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170982
|
|
|
chr16
|
1043614
|
1047490
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170983
|
|
|
chr16
|
1043655
|
1047419
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170984
|
|
|
chr16
|
1046467
|
1047532
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170987
|
|
|
chr16
|
1046855
|
1050010
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108170989
|
|
|
chr16
|
1046880
|
1047440
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108170990
|
|
|
chr16
|
1047294
|
1047844
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21684043
|
|
|
chr16
|
1047377
|
1047385
|
SP1
|
TRANSFAC
|
yes
|
|
9128597
|
|
|
chr16
|
1047377
|
1047387
|
SP1
|
JASPAR
|
yes
|
|
9128598
|
|
|
chr16
|
1047377
|
1047398
|
ZNF263
|
JASPAR
|
yes
|
|
9128599
|
|
|
chr16
|
1047379
|
1047385
|
MAZ
|
TRANSFAC
|
yes
|
|
9128600
|
|
Genes associated with rs2549194[chr16:1047385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
770581
|
772601
|
+
|
FAM173A
|
ENSG00000103254.5
|
770581
|
274784
|
Lung
|
0.0634663
|
14364
|
|