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- rs2809361[chr1:200622353]
Enhancers that have rs2809361[chr1:200622353]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
200621919 |
200626161 |
enh85991 |
|
|
Transcript factors that have rs2809361[chr1:200622353]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
200619500
|
200623062
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855416
|
|
|
chr1
|
200619530
|
200622423
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855417
|
|
|
chr1
|
200619689
|
200622784
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855418
|
|
|
chr1
|
200620089
|
200622695
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855419
|
|
|
chr1
|
200621317
|
200622804
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855420
|
|
|
chr1
|
200621750
|
200622562
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855421
|
|
|
chr1
|
200621775
|
200623203
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107855422
|
|
|
chr1
|
200621834
|
200623052
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107855423
|
|
|
chr1
|
200621870
|
200622826
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107855424
|
|
|
chr1
|
200621906
|
200622959
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855425
|
|
|
chr1
|
200621930
|
200622401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21363724
|
|
|
chr1
|
200621930
|
200622401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107855426
|
|
|
chr1
|
200621936
|
200622764
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855427
|
|
|
chr1
|
200621950
|
200622713
|
CTCF
|
GTRD
|
no
|
Spleen
|
107855428
|
|
|
chr1
|
200622021
|
200622796
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855429
|
|
|
chr1
|
200622040
|
200622916
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855430
|
|
|
chr1
|
200622042
|
200622892
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855431
|
|
|
chr1
|
200622051
|
200622691
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855432
|
|
|
chr1
|
200622054
|
200622609
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855433
|
|
|
chr1
|
200622059
|
200622695
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855434
|
|
|
chr1
|
200622062
|
200622860
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855435
|
|
|
chr1
|
200622063
|
200622814
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107855436
|
|
|
chr1
|
200622065
|
200622900
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855437
|
|
|
chr1
|
200622073
|
200623004
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107855438
|
|
|
chr1
|
200622107
|
200622711
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855439
|
|
|
chr1
|
200622117
|
200622713
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855440
|
|
|
chr1
|
200622177
|
200622747
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855441
|
|
|
chr1
|
200622181
|
200622745
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107855442
|
|
|
chr1
|
200622184
|
200622660
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855443
|
|
|
chr1
|
200622196
|
200622780
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107855444
|
|
|
chr1
|
200622204
|
200622765
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855445
|
|
|
chr1
|
200622211
|
200622602
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107855446
|
|
|
chr1
|
200622224
|
200622719
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107855447
|
|
|
chr1
|
200622227
|
200622694
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107855448
|
|
|
chr1
|
200622236
|
200622763
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855449
|
|
|
chr1
|
200622239
|
200622782
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107855450
|
|
|
chr1
|
200622240
|
200622662
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855451
|
|
|
chr1
|
200622243
|
200622826
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
107855452
|
|
|
chr1
|
200622250
|
200622846
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855453
|
|
|
chr1
|
200622263
|
200622647
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855454
|
|
|
chr1
|
200622277
|
200622658
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855455
|
|
|
chr1
|
200622285
|
200622703
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855456
|
|
|
chr1
|
200622295
|
200622620
|
CTCF
|
GTRD
|
no
|
Lung
|
107855457
|
|
|
chr1
|
200622299
|
200622716
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107855458
|
|
|
chr1
|
200622306
|
200622784
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855459
|
|
|
chr1
|
200622311
|
200622547
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855460
|
|
|
chr1
|
200622316
|
200622593
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107855461
|
|
|
chr1
|
200622317
|
200622778
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107855462
|
|
|
chr1
|
200622320
|
200622854
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107855463
|
|
|
chr1
|
200622325
|
200622719
|
CTCF
|
GTRD
|
no
|
Kidney
|
107855464
|
|
|
chr1
|
200622337
|
200622626
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855465
|
|
|
chr1
|
200622339
|
200622692
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107855466
|
|
|
chr1
|
200622340
|
200622580
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107855467
|
|
|
chr1
|
200622352
|
200622356
|
NFE
|
TRANSFAC
|
yes
|
|
34461635
|
|
|
chr1
|
200622352
|
200622357
|
GATA1
|
TRANSFAC
|
yes
|
|
34461636
|
|
|
chr1
|
200622352
|
200622357
|
GATA1
|
TRANSFAC
|
yes
|
|
118430285
|
|
|
chr1
|
200622352
|
200622358
|
GATA3
|
JASPAR
|
yes
|
|
34461637
|
|
|
chr1
|
200622352
|
200622358
|
GATA3
|
JASPAR
|
yes
|
|
118430286
|
|
|
chr1
|
200622353
|
200622374
|
MAFG
|
JASPAR
|
yes
|
|
34461638
|
|
|
chr1
|
200622353
|
200622374
|
MAFG
|
JASPAR
|
yes
|
|
118430287
|
|
Genes associated with rs2809361[chr1:200622353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |