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- rs2816872[chr1:90446469]
Enhancers that have rs2816872[chr1:90446469]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
90444285 |
90450635 |
enh108348 |
|
|
Transcript factors that have rs2816872[chr1:90446469]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
90446101
|
90446631
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21325504
|
|
|
chr1
|
90446463
|
90446472
|
SRY
|
JASPAR
|
yes
|
|
30640727
|
|
|
chr1
|
90446466
|
90446475
|
VENTX
|
JASPAR
|
yes
|
|
30640729
|
|
|
chr1
|
90446466
|
90446476
|
GSX2
|
JASPAR
|
yes
|
|
30640730
|
|
|
chr1
|
90446466
|
90446476
|
MNX1
|
JASPAR
|
yes
|
|
30640731
|
|
|
chr1
|
90446467
|
90446475
|
BARX1
|
JASPAR
|
yes
|
|
30640732
|
|
Genes associated with rs2816872[chr1:90446469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |