EnhancerDB
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Enhancers that have rs28397159[chr16:12646333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12630505 12654813 enh3901
Liver (HepG2) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs28397159[chr16:12646333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12645962 12647648 ZNF274 GTRD no Bone Marrow (K562) 108183114
chr16 12645972 12647457 ZNF274 GTRD no Bone Marrow (K562) 108183115
chr16 12646020 12647481 ZNF274 GTRD no Blood (GM12878) 21691417
chr16 12646020 12647481 ZNF274 GTRD no Blood (GM12878) 108183116
chr16 12646026 12647351 ZNF274 GTRD no Bone Marrow (K562) 108183117
chr16 12646054 12647335 ZNF274 GTRD no Blood (GM12878) 21691418
chr16 12646054 12647335 ZNF274 GTRD no Blood (GM12878) 108183118
chr16 12646061 12647511 ZNF274 GTRD no Blood (GM12878) 21691419
chr16 12646061 12647511 ZNF274 GTRD no Blood (GM12878) 108183119
chr16 12646108 12647496 ZNF274 GTRD no Blood (GM12878) 21691420
chr16 12646108 12647496 ZNF274 GTRD no Blood (GM12878) 108183120
chr16 12646124 12647365 ZNF274 GTRD no Bone Marrow (K562) 108183121
chr16 12646141 12647344 ZNF274 GTRD no Bone Marrow (K562) 108183122
chr16 12646145 12647420 ZNF274 GTRD no Blood (GM12878) 21691421
chr16 12646145 12647420 ZNF274 GTRD no Blood (GM12878) 108183123
chr16 12646180 12647403 ZNF274 GTRD no Bone Marrow (K562) 108183124
chr16 12646183 12647513 ZNF274 GTRD no Blood (GM12878) 21691422
chr16 12646183 12647513 ZNF274 GTRD no Blood (GM12878) 108183125
chr16 12646192 12647370 ZNF274 GTRD no Bone Marrow (K562) 108183126
chr16 12646195 12647594 ZNF274 GTRD no Blood (GM12878) 21691423
chr16 12646195 12647594 ZNF274 GTRD no Blood (GM12878) 108183127
chr16 12646197 12647442 ZNF274 GTRD no Bone Marrow (K562) 108183128
chr16 12646201 12647478 ZNF274 GTRD no Blood (GM12878) 21691424
chr16 12646201 12647478 ZNF274 GTRD no Blood (GM12878) 108183129
chr16 12646208 12647278 ZNF274 GTRD no Cervix (HeLa-S3) 108183130
chr16 12646230 12647347 ZNF274 GTRD no Bone Marrow (K562) 108183131
chr16 12646230 12647419 ZNF274 GTRD no Bone Marrow (K562) 108183132
chr16 12646232 12647323 ZBTB33 GTRD no Lung (A549) 108183133
chr16 12646236 12647346 ZBTB33 GTRD no Brain (SK-N-SH) 108183134
chr16 12646240 12647233 ZNF274 GTRD no Blood (GM12878) 21691425
chr16 12646240 12647233 ZNF274 GTRD no Blood (GM12878) 108183135
chr16 12646241 12647471 ZNF274 GTRD no Bone Marrow (K562) 108183136
chr16 12646259 12647233 ZNF274 GTRD no Blood (GM12878) 21691426
chr16 12646259 12647233 ZNF274 GTRD no Blood (GM12878) 108183137
chr16 12646277 12647274 ZBTB33 GTRD no Brain (SK-N-SH) 108183138
chr16 12646303 12647170 ZNF274 GTRD no Bone Marrow (K562) 108183139
chr16 12646325 12647362 ZNF274 GTRD no Blood (GM12878) 21691427
chr16 12646325 12647362 ZNF274 GTRD no Blood (GM12878) 108183140
chr16 12646326 12647232 ZBTB33 GTRD no Brain (SK-N-SH) 108183141
chr16 12646332 12646337 NFY TRANSFAC yes 9590402
Genes associated with rs28397159[chr16:12646333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 11772936 11836734 - TXNDC11 ENSG00000153066.8 11836734 809599 Ovary 0.258243 14549