EnhancerDB
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  3. rs28399709[chr15:39180689]
Enhancers that have rs28399709[chr15:39180689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39174236 39183340 enh16051
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Placenta Pancreas
Transcript factors that have rs28399709[chr15:39180689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39179388 39181170 ZBTB33 GTRD no Brain (SK-N-SH) 21647771
chr15 39179812 39182425 ZBTB33 GTRD no Brain (SK-N-SH) 21647772
chr15 39180199 39181248 ZBTB33 GTRD no Brain (SK-N-SH) 21647773
chr15 39180218 39181326 ZBTB33 GTRD no Brain (SK-N-SH) 21647774
chr15 39180295 39182491 ZBTB33 GTRD no Brain (SK-N-SH) 21647775
chr15 39180297 39181172 ZBTB33 GTRD no Brain (SK-N-SH) 21647776
chr15 39180319 39181030 ZBTB33 GTRD no Brain (SK-N-SH) 21647777
chr15 39180320 39180981 ZBTB33 GTRD no Brain (SK-N-SH) 21647778
chr15 39180337 39181180 ZBTB33 GTRD no Brain (SK-N-SH) 21647779
chr15 39180363 39181156 ZBTB33 GTRD no Brain (SK-N-SH) 21647780
chr15 39180379 39181007 ZBTB33 GTRD no Brain (SK-N-SH) 21647781
chr15 39180427 39181574 AR GTRD no Prostate (PC-3) 21647782
chr15 39180486 39181149 ZBTB33 GTRD no Brain (SK-N-SH) 21647783
chr15 39180677 39180695 RARA JASPAR yes 22843654
Genes associated with rs28399709[chr15:39180689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More