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- rs28404130[chr17:80342514]
Enhancers that have rs28404130[chr17:80342514]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
80335418 |
80346295 |
enh44508 |
|
|
Transcript factors that have rs28404130[chr17:80342514]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
80342386
|
80342982
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
21800282
|
|
|
chr17
|
80342386
|
80342982
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108312144
|
|
|
chr17
|
80342398
|
80342846
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108312145
|
|
|
chr17
|
80342474
|
80342802
|
MYC
|
UCSC Txn Factor
|
no
|
Conserved
|
108312146
|
|
|
chr17
|
80342479
|
80342803
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
21800283
|
|
|
chr17
|
80342479
|
80342803
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108312147
|
|
|
chr17
|
80342483
|
80342759
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108312148
|
|
|
chr17
|
80342489
|
80342779
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108312149
|
|
|
chr17
|
80342491
|
80342867
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108312150
|
|
|
chr17
|
80342493
|
80342769
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108312151
|
|
|
chr17
|
80342499
|
80342514
|
TFAP2A
|
JASPAR
|
yes
|
|
56365266
|
|
|
chr17
|
80342507
|
80342522
|
RUNX2
|
JASPAR
|
yes
|
|
56365267
|
|
Genes associated with rs28404130[chr17:80342514], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |