EnhancerDB
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  3. rs28444742[chr1:235143958]
Enhancers that have rs28444742[chr1:235143958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs28444742[chr1:235143958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235143527 235144255 ZNF274 GTRD no Cervix (HeLa-S3) 21402933
chr1 235143713 235144072 ZNF274 GTRD no Bone Marrow (K562) 21402934
chr1 235143724 235144112 ZNF274 GTRD no Liver (HepG2) 21402935
chr1 235143729 235144131 ZNF143 GTRD no Epithelial (MCF-7) 21402936
chr1 235143767 235144148 ZNF274 GTRD no Cervix (HeLa-S3) 21402937
chr1 235143918 235144210 ZNF274 GTRD no Blood (GM12878) 21402938
chr1 235143921 235144146 SOX2 GTRD no Neural Stem Cells (H9) 21402939
chr1 235143951 235143967 SOX8 JASPAR yes 36341553
Genes associated with rs28444742[chr1:235143958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More