EnhancerDB
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  3. rs28446177[chr1:235121871]
Enhancers that have rs28446177[chr1:235121871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28446177[chr1:235121871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235121320 235121934 ZNF274 GTRD no Liver (HepG2) 21402627
chr1 235121868 235121881 NFKB1 JASPAR yes 36338587
chr1 235121870 235121888 ESR2 JASPAR yes 36338588
Genes associated with rs28446177[chr1:235121871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More