EnhancerDB
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  3. rs28480085[chr17:47978594]
Enhancers that have rs28480085[chr17:47978594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47955625 47981555 enh17209
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Ovary Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs28480085[chr17:47978594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47977433 47979806 ZNF143 GTRD no Epithelial (MCF-7) 21769188
chr17 47977938 47979346 ZNF143 GTRD no Epithelial (MCF-7) 21769189
chr17 47977980 47979114 ZNF143 GTRD no Epithelial (MCF-7) 21769190
chr17 47978112 47978837 ZNF143 GTRD no Epithelial (MCF-7) 21769191
chr17 47978142 47979070 ZNF143 GTRD no Epithelial (MCF-7) 21769192
chr17 47978166 47978856 ZNF143 GTRD no Epithelial (MCF-7) 21769193
chr17 47978201 47978807 ZNF143 GTRD no Epithelial (MCF-7) 21769194
chr17 47978214 47979825 ZNF143 GTRD no Epithelial (MCF-7) 21769195
chr17 47978224 47978700 ZNF143 GTRD no Epithelial (MCF-7) 21769196
chr17 47978224 47978782 ZNF274 GTRD no Liver (HepG2) 21769197
chr17 47978228 47978820 ZNF274 GTRD no Liver (HepG2) 21769198
chr17 47978232 47978947 ZNF274 GTRD no Liver (HepG2) 21769199
chr17 47978241 47979872 ZNF143 GTRD no Epithelial (MCF-7) 21769200
chr17 47978242 47978850 ZNF274 GTRD no Liver (HepG2) 21769201
chr17 47978242 47979179 ZNF143 GTRD no Epithelial (MCF-7) 21769202
chr17 47978245 47979007 ZNF143 GTRD no Epithelial (MCF-7) 21769203
chr17 47978265 47978888 ZNF274 GTRD no Liver (HepG2) 21769204
chr17 47978285 47978794 ZNF143 GTRD no Epithelial (MCF-7) 21769205
chr17 47978287 47978766 ZNF143 GTRD no Epithelial (MCF-7) 21769206
chr17 47978292 47978784 ZNF274 GTRD no Liver (HepG2) 21769207
chr17 47978301 47979076 ZNF274 GTRD no Liver (HepG2) 21769208
chr17 47978309 47978727 ZNF274 GTRD no Liver (HepG2) 21769209
chr17 47978326 47978675 ZNF143 GTRD no Epithelial (MCF-7) 21769210
chr17 47978329 47979004 ZNF274 GTRD no Liver (HepG2) 21769211
chr17 47978345 47979196 ZNF143 GTRD no Epithelial (MCF-7) 21769212
chr17 47978399 47978733 ZNF274 GTRD no Liver (HepG2) 21769213
chr17 47978400 47978752 ZNF274 GTRD no Liver (HepG2) 21769214
chr17 47978479 47978674 ZNF143 GTRD no Epithelial (MCF-7) 21769215
Genes associated with rs28480085[chr17:47978594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 47300724 47308128 - PHOSPHO1 ENSG00000173868.7 47308128 670466 Ovary 0.406648 16011