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- rs28485885[chr16:89185662]
Enhancers that have rs28485885[chr16:89185662]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
89182985 |
89187135 |
enh75858 |
|
|
Transcript factors that have rs28485885[chr16:89185662]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
89182778
|
89185966
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225038
|
|
|
chr16
|
89182814
|
89186024
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225039
|
|
|
chr16
|
89183185
|
89186244
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225040
|
|
|
chr16
|
89183236
|
89185867
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225042
|
|
|
chr16
|
89183258
|
89186213
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225043
|
|
|
chr16
|
89183351
|
89185873
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225044
|
|
|
chr16
|
89183574
|
89186926
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225045
|
|
|
chr16
|
89183887
|
89186326
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225046
|
|
|
chr16
|
89183899
|
89185865
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225047
|
|
|
chr16
|
89183945
|
89185859
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225048
|
|
|
chr16
|
89184151
|
89185764
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225049
|
|
|
chr16
|
89184275
|
89185893
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108225050
|
|
|
chr16
|
89184602
|
89185897
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225052
|
|
|
chr16
|
89184719
|
89186995
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225055
|
|
|
chr16
|
89185043
|
89185850
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225064
|
|
|
chr16
|
89185103
|
89185953
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225065
|
|
|
chr16
|
89185162
|
89186002
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108225066
|
|
|
chr16
|
89185165
|
89186028
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108225067
|
|
|
chr16
|
89185184
|
89187684
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108225068
|
|
|
chr16
|
89185186
|
89185865
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108225069
|
|
|
chr16
|
89185648
|
89185662
|
PLAG1
|
JASPAR
|
yes
|
|
12323684
|
|
|
chr16
|
89185657
|
89185666
|
SP1
|
TRANSFAC
|
yes
|
|
12323685
|
|
|
chr16
|
89185658
|
89185664
|
SP1
|
TRANSFAC
|
yes
|
|
12323686
|
|
|
chr16
|
89185658
|
89185668
|
SP1
|
JASPAR
|
yes
|
|
12323687
|
|
|
chr16
|
89185658
|
89185678
|
RREB1
|
JASPAR
|
yes
|
|
12323688
|
|
|
chr16
|
89185659
|
89185666
|
SP1
|
TRANSFAC
|
yes
|
|
12323689
|
|
|
chr16
|
89185660
|
89185665
|
SP1
|
TRANSFAC
|
yes
|
|
12323690
|
|
|
chr16
|
89185660
|
89185666
|
SP1
|
TRANSFAC
|
yes
|
|
12323691
|
|
Genes associated with rs28485885[chr16:89185662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |