EnhancerDB
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  3. rs28539478[chr14:105500883]
Enhancers that have rs28539478[chr14:105500883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 105493717 105501175 enh80937
Prostate (PC-3) Brain (SK-N-SH)
chr14 105500629 105500990 vista19267
VISTA
Transcript factors that have rs28539478[chr14:105500883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 105495108 105501213 ZNF274 GTRD no Liver (HepG2) 108128714
chr14 105495108 105501213 ZNF274 GTRD no Liver (HepG2) 108128715
chr14 105497552 105501068 ZNF274 GTRD no Liver (HepG2) 108128718
chr14 105497552 105501068 ZNF274 GTRD no Liver (HepG2) 108128719
chr14 105498456 105501092 ZNF143 GTRD no Epithelial (MCF-7) 108128721
chr14 105498456 105501092 ZNF143 GTRD no Epithelial (MCF-7) 108128722
chr14 105498624 105501187 ZNF274 GTRD no Liver (HepG2) 108128727
chr14 105498624 105501187 ZNF274 GTRD no Liver (HepG2) 108128728
chr14 105498650 105501015 ZNF274 GTRD no Liver (HepG2) 108128729
chr14 105498650 105501015 ZNF274 GTRD no Liver (HepG2) 108128730
chr14 105498900 105504065 ZBTB33 GTRD no Lung (A549) 108128735
chr14 105498900 105504065 ZBTB33 GTRD no Lung (A549) 108128736
chr14 105498900 105504065 ZBTB33 GTRD no Lung (A549) 108128737
chr14 105499055 105500898 ZNF274 GTRD no Liver (HepG2) 108128738
chr14 105499055 105500898 ZNF274 GTRD no Liver (HepG2) 108128739
chr14 105499788 105501282 ZBTB33 GTRD no Lung (A549) 108128744
chr14 105499788 105501282 ZBTB33 GTRD no Lung (A549) 108128745
chr14 105500074 105502790 ZNF143 GTRD no Epithelial (MCF-7) 108128748
chr14 105500074 105502790 ZNF143 GTRD no Epithelial (MCF-7) 108128749
chr14 105500074 105502790 ZNF143 GTRD no Epithelial (MCF-7) 108128750
chr14 105500086 105504095 ZBTB33 GTRD no Lung (A549) 108128751
chr14 105500086 105504095 ZBTB33 GTRD no Lung (A549) 108128752
chr14 105500086 105504095 ZBTB33 GTRD no Lung (A549) 108128753
chr14 105500267 105501132 ZNF143 GTRD no Epithelial (MCF-7) 108128754
chr14 105500267 105501132 ZNF143 GTRD no Epithelial (MCF-7) 108128755
chr14 105500272 105501236 ZNF274 GTRD no Blood (GM12878) 108128756
chr14 105500272 105501236 ZNF274 GTRD no Blood (GM12878) 108128757
chr14 105500294 105501209 ZNF274 GTRD no Cervix (HeLa-S3) 108128760
chr14 105500294 105501209 ZNF274 GTRD no Cervix (HeLa-S3) 108128761
chr14 105500319 105501212 ZBTB33 GTRD no Lung (A549) 108128762
chr14 105500319 105501212 ZBTB33 GTRD no Lung (A549) 108128763
chr14 105500397 105501159 TCF7L2 GTRD no Colon (HCT116) 108128766
chr14 105500397 105501159 TCF7L2 GTRD no Colon (HCT116) 108128767
chr14 105500425 105501008 ZBTB33 GTRD no Lung (A549) 108128768
chr14 105500425 105501008 ZBTB33 GTRD no Lung (A549) 108128769
chr14 105500440 105501289 ZNF274 GTRD no Blood (GM12878) 108128770
chr14 105500440 105501289 ZNF274 GTRD no Blood (GM12878) 108128771
chr14 105500443 105501132 ZNF274 GTRD no Blood (GM12878) 108128772
chr14 105500443 105501132 ZNF274 GTRD no Blood (GM12878) 108128773
chr14 105500466 105500890 ZNF274 GTRD no Liver (HepG2) 108128774
chr14 105500466 105500890 ZNF274 GTRD no Liver (HepG2) 108128775
chr14 105500492 105501246 ZNF274 GTRD no Blood (GM12878) 108128776
chr14 105500492 105501246 ZNF274 GTRD no Blood (GM12878) 108128777
chr14 105500526 105501220 ZBTB33 GTRD no Lung (A549) 108128778
chr14 105500526 105501220 ZBTB33 GTRD no Lung (A549) 108128779
chr14 105500670 105500980 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108128780
chr14 105500800 105501087 ZNF274 GTRD no Blood (GM12878) 108128781
chr14 105500831 105500924 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108128782
chr14 105500870 105500884 RXRB JASPAR yes 107619843
chr14 105500870 105500884 RXRG JASPAR yes 107619844
chr14 105500870 105500884 RXRB JASPAR yes 118069197
chr14 105500870 105500884 RXRG JASPAR yes 118069198
chr14 105500877 105500889 HES5 JASPAR yes 107619845
chr14 105500877 105500889 HES5 JASPAR yes 118069199
Genes associated with rs28539478[chr14:105500883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More