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- rs28609929[chr17:65242356]
Enhancers that have rs28609929[chr17:65242356]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
65242250 |
65242562 |
vista25627 |
|
|
Transcript factors that have rs28609929[chr17:65242356]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
65240956
|
65242531
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108285506
|
|
|
chr17
|
65241227
|
65242426
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108285507
|
|
|
chr17
|
65242046
|
65242426
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108285514
|
|
|
chr17
|
65242078
|
65242500
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108285515
|
|
|
chr17
|
65242089
|
65242459
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108285516
|
|
|
chr17
|
65242148
|
65242808
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108285520
|
|
|
chr17
|
65242197
|
65242507
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108285521
|
|
|
chr17
|
65242345
|
65242364
|
REST
|
JASPAR
|
yes
|
|
21278819
|
|
|
chr17
|
65242348
|
65242360
|
GLI2
|
JASPAR
|
yes
|
|
21278820
|
|
Genes associated with rs28609929[chr17:65242356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |