Enhancers that have rs28654688[chr19:4340171]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4336645 4341069 enh89918

Transcript factors that have rs28654688[chr19:4340171]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4340166 4340178 HES5 JASPAR yes 112168464
chr19 4340166 4340178 HES7 JASPAR yes 112168465
chr19 4340166 4340186 TP63 JASPAR yes 112168466
chr19 4340167 4340177 BHLHE40 JASPAR yes 112168467
chr19 4340167 4340177 BHLHE41 JASPAR yes 112168468
chr19 4340167 4340177 HEY1 JASPAR yes 112168469
chr19 4340167 4340177 HEY2 JASPAR yes 112168470
chr19 4340167 4340177 MAX JASPAR yes 112168471
chr19 4340167 4340177 MNT JASPAR yes 112168472
chr19 4340167 4340177 TFE3 JASPAR yes 112168473
chr19 4340167 4340177 TFEB JASPAR yes 112168474
chr19 4340167 4340187 ESR1 JASPAR yes 112168475
chr19 4340169 4340174 MYC TRANSFAC yes 112168476
chr19 4340169 4340174 USF1 TRANSFAC yes 112168477
chr19 4340169 4340174 USF2 TRANSFAC yes 112168478

Genes associated with rs28654688[chr19:4340171], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More