EnhancerDB
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  3. rs28693033[chr16:19107627]
Enhancers that have rs28693033[chr16:19107627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19100947 19111095 enh16587
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Lung (A549) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs28693033[chr16:19107627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19107227 19109213 TCF7L2 GTRD no Colon (HCT116) 21695164
chr16 19107310 19108723 ZBTB33 GTRD no Lung (A549) 21695165
chr16 19107311 19108223 TCF7L2 GTRD no Colon (HCT116) 21695166
chr16 19107333 19108735 ZBTB33 GTRD no Lung (A549) 21695167
chr16 19107334 19109011 ZNF274 GTRD no Cervix (HeLa-S3) 21695168
chr16 19107338 19108058 ZBTB33 GTRD no Lung (A549) 21695169
chr16 19107379 19108735 ZBTB33 GTRD no Lung (A549) 21695170
chr16 19107389 19108109 ZBTB33 GTRD no Lung (A549) 21695171
chr16 19107412 19108013 ZNF274 GTRD no Cervix (HeLa-S3) 21695172
chr16 19107420 19107985 ZNF143 GTRD no Epithelial (MCF-7) 21695173
chr16 19107420 19108187 ZBTB33 GTRD no Lung (A549) 21695174
chr16 19107429 19107806 ZNF143 GTRD no Epithelial (MCF-7) 21695175
chr16 19107438 19107938 ZNF274 GTRD no Cervix (HeLa-S3) 21695176
chr16 19107443 19108664 TCF7L2 GTRD no Colon (HCT116) 21695177
chr16 19107456 19108945 ZBTB33 GTRD no Lung (A549) 21695178
chr16 19107459 19108145 ZNF143 GTRD no Epithelial (MCF-7) 21695179
chr16 19107460 19108080 ZNF274 GTRD no Cervix (HeLa-S3) 21695180
chr16 19107464 19108336 ZNF274 GTRD no Cervix (HeLa-S3) 21695181
chr16 19107465 19108103 ZNF274 GTRD no Cervix (HeLa-S3) 21695182
chr16 19107472 19108301 ZNF274 GTRD no Cervix (HeLa-S3) 21695183
chr16 19107474 19108255 TCF7L2 GTRD no Colon (HCT116) 21695184
chr16 19107478 19108623 ZBTB33 GTRD no Lung (A549) 21695185
chr16 19107480 19108137 ZBTB33 GTRD no Lung (A549) 21695186
chr16 19107483 19108223 ZNF274 GTRD no Cervix (HeLa-S3) 21695187
chr16 19107484 19108052 ERG GTRD no Prostate (RWPE1) 21695188
chr16 19107485 19108141 ZNF274 GTRD no Cervix (HeLa-S3) 21695189
chr16 19107493 19108199 ZNF143 GTRD no Epithelial (MCF-7) 21695190
chr16 19107499 19108327 ZNF143 GTRD no Epithelial (MCF-7) 21695191
chr16 19107507 19108420 ZBTB33 GTRD no Lung (A549) 21695192
chr16 19107510 19108236 ZBTB33 GTRD no Lung (A549) 21695193
chr16 19107510 19108383 ZNF143 GTRD no Epithelial (MCF-7) 21695194
chr16 19107516 19108304 ZNF143 GTRD no Epithelial (MCF-7) 21695195
chr16 19107533 19108121 ZNF274 GTRD no Cervix (HeLa-S3) 21695196
chr16 19107533 19108141 ZNF274 GTRD no Cervix (HeLa-S3) 21695197
chr16 19107569 19108138 ZNF143 GTRD no Epithelial (MCF-7) 21695198
chr16 19107576 19108120 ZNF143 GTRD no Epithelial (MCF-7) 21695199
chr16 19107581 19108185 ZNF143 GTRD no Epithelial (MCF-7) 21695200
chr16 19107596 19108149 ZNF274 GTRD no Cervix (HeLa-S3) 21695201
chr16 19107601 19108239 ZNF143 GTRD no Epithelial (MCF-7) 21695202
chr16 19107616 19107630 NR2F1 JASPAR yes 9849319
chr16 19107624 19107639 SCRT1 JASPAR yes 9849320
chr16 19107627 19107639 PKNOX1 JASPAR yes 9849321
chr16 19107627 19107639 TGIF1 JASPAR yes 9849322
Genes associated with rs28693033[chr16:19107627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More