EnhancerDB
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  3. rs28760568[chr17:47978905]
Enhancers that have rs28760568[chr17:47978905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47955625 47981555 enh17209
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Ovary Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs28760568[chr17:47978905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47977433 47979806 ZNF143 GTRD no Epithelial (MCF-7) 21769188
chr17 47977938 47979346 ZNF143 GTRD no Epithelial (MCF-7) 21769189
chr17 47977980 47979114 ZNF143 GTRD no Epithelial (MCF-7) 21769190
chr17 47978142 47979070 ZNF143 GTRD no Epithelial (MCF-7) 21769192
chr17 47978214 47979825 ZNF143 GTRD no Epithelial (MCF-7) 21769195
chr17 47978232 47978947 ZNF274 GTRD no Liver (HepG2) 21769199
chr17 47978241 47979872 ZNF143 GTRD no Epithelial (MCF-7) 21769200
chr17 47978242 47979179 ZNF143 GTRD no Epithelial (MCF-7) 21769202
chr17 47978245 47979007 ZNF143 GTRD no Epithelial (MCF-7) 21769203
chr17 47978301 47979076 ZNF274 GTRD no Liver (HepG2) 21769208
chr17 47978329 47979004 ZNF274 GTRD no Liver (HepG2) 21769211
chr17 47978345 47979196 ZNF143 GTRD no Epithelial (MCF-7) 21769212
chr17 47978834 47979114 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21769216
chr17 47978848 47979108 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21769217
chr17 47978874 47979150 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21769218
chr17 47978900 47978906 NFE2 TRANSFAC yes 54667580
chr17 47978904 47978912 SP1 TRANSFAC yes 54667581
Genes associated with rs28760568[chr17:47978905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More