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- rs2881654[chr3:12396955]
Enhancers that have rs2881654[chr3:12396955]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr3 |
12389745 |
12398835 |
enh20339 |
|
|
Transcript factors that have rs2881654[chr3:12396955]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr3
|
12396949
|
12396959
|
MLXIPL
|
JASPAR
|
yes
|
|
476124
|
|
|
chr3
|
12396951
|
12396956
|
MYC
|
TRANSFAC
|
yes
|
|
476125
|
|
|
chr3
|
12396951
|
12396956
|
USF1
|
TRANSFAC
|
yes
|
|
476126
|
|
|
chr3
|
12396951
|
12396956
|
USF2
|
TRANSFAC
|
yes
|
|
476127
|
|
|
chr3
|
12396955
|
12396965
|
ALX3
|
JASPAR
|
yes
|
|
476128
|
|
|
chr3
|
12396955
|
12396965
|
GSX1
|
JASPAR
|
yes
|
|
476129
|
|
|
chr3
|
12396955
|
12396965
|
GSX2
|
JASPAR
|
yes
|
|
476130
|
|
|
chr3
|
12396955
|
12396965
|
HOXB2
|
JASPAR
|
yes
|
|
476131
|
|
|
chr3
|
12396955
|
12396965
|
HOXB3
|
JASPAR
|
yes
|
|
476132
|
|
|
chr3
|
12396955
|
12396965
|
MEOX2
|
JASPAR
|
yes
|
|
476133
|
|
|
chr3
|
12396955
|
12396965
|
MIXL1
|
JASPAR
|
yes
|
|
476134
|
|
|
chr3
|
12396955
|
12396965
|
MNX1
|
JASPAR
|
yes
|
|
476135
|
|
Genes associated with rs2881654[chr3:12396955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr3
|
12328867
|
12475855
|
+
|
PPARG
|
ENSG00000132170.15
|
12328867
|
0
|
Esophagus
|
0.0780702
|
3415
|
|