EnhancerDB
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  3. rs3001309[chr1:28847964]
Enhancers that have rs3001309[chr1:28847964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs3001309[chr1:28847964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28847960 28847978 E2F3 JASPAR yes 27775418
chr1 28847962 28847975 ZBED1 JASPAR yes 27775419
chr1 28847963 28847975 E2F1 JASPAR yes 27775420
Genes associated with rs3001309[chr1:28847964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More