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- rs3176828[chr17:80190014]
Enhancers that have rs3176828[chr17:80190014]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
80186825 |
80193555 |
enh107730 |
|
|
Transcript factors that have rs3176828[chr17:80190014]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
80185948
|
80191522
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108311237
|
|
|
chr17
|
80188669
|
80190041
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108311258
|
|
|
chr17
|
80189006
|
80191124
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108311326
|
|
|
chr17
|
80189054
|
80190077
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108311327
|
|
Genes associated with rs3176828[chr17:80190014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
80196899
|
80231607
|
-
|
CSNK1D
|
ENSG00000141551.10
|
80231607
|
6885
|
Lung
|
0.0186606
|
16389
|
|