EnhancerDB
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  3. rs34571183[chr12:54220411]
Enhancers that have rs34571183[chr12:54220411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs34571183[chr12:54220411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54219764 54220895 ZNF143 GTRD no Epithelial (MCF-7) 21550025
chr12 54219766 54221126 ZNF274 GTRD no Cervix (HeLa-S3) 21550026
chr12 54219772 54220952 ZNF143 GTRD no Epithelial (MCF-7) 21550027
chr12 54219819 54221318 ZNF274 GTRD no Cervix (HeLa-S3) 21550028
chr12 54219924 54220729 ZNF143 GTRD no Epithelial (MCF-7) 21550029
chr12 54219933 54220750 ZNF143 GTRD no Epithelial (MCF-7) 21550030
chr12 54219940 54220998 ZNF143 GTRD no Epithelial (MCF-7) 21550031
chr12 54219941 54220726 ZNF143 GTRD no Epithelial (MCF-7) 21550032
chr12 54219948 54220778 ZNF143 GTRD no Epithelial (MCF-7) 21550033
chr12 54219948 54221018 ZNF143 GTRD no Epithelial (MCF-7) 21550034
chr12 54219949 54220544 ZNF274 GTRD no Cervix (HeLa-S3) 21550035
chr12 54220025 54221678 ZNF274 GTRD no Cervix (HeLa-S3) 21550036
chr12 54220043 54220509 ZNF274 GTRD no Liver (HepG2) 21550037
chr12 54220053 54220463 ZNF274 GTRD no Liver (HepG2) 21550038
chr12 54220063 54220564 ZNF274 GTRD no Liver (HepG2) 21550039
chr12 54220079 54220658 ZNF274 GTRD no Liver (HepG2) 21550040
chr12 54220092 54220492 ZNF143 GTRD no Epithelial (MCF-7) 21550041
chr12 54220097 54220476 ZNF274 GTRD no Liver (HepG2) 21550042
chr12 54220107 54220547 ZNF143 GTRD no Epithelial (MCF-7) 21550044
chr12 54220108 54220681 ZNF274 GTRD no Liver (HepG2) 21550045
chr12 54220111 54220738 ZNF143 GTRD no Epithelial (MCF-7) 21550046
chr12 54220112 54220548 ZNF274 GTRD no Cervix (HeLa-S3) 21550047
chr12 54220115 54220862 ZNF274 GTRD no Liver (HepG2) 21550048
chr12 54220116 54220626 ZNF143 GTRD no Epithelial (MCF-7) 21550049
chr12 54220117 54220523 ZNF274 GTRD no Cervix (HeLa-S3) 21550050
chr12 54220121 54220569 ZNF143 GTRD no Epithelial (MCF-7) 21550051
chr12 54220122 54220513 ZNF274 GTRD no Liver (HepG2) 21550052
chr12 54220125 54220565 ZNF274 GTRD no Liver (HepG2) 21550053
chr12 54220402 54220416 ZIC1 JASPAR yes 121011732
Genes associated with rs34571183[chr12:54220411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More