EnhancerDB
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  3. rs348390[chr19:6536662]
Enhancers that have rs348390[chr19:6536662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6535385 6540520 enh4986
Prostate (PC-3) Cervix (HeLa-S3) Blood (OCI-LY7) Peripheral Blood (MM.1S) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs348390[chr19:6536662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6533744 6540314 POLR2A UCSC Txn Factor no Conserved 108378505
chr19 6535298 6536896 ZNF274 GTRD no Cervix (HeLa-S3) 21845605
chr19 6535326 6537159 TCF7L2 GTRD no Colon (HCT116) 21845606
chr19 6535631 6536820 STAT3 GTRD no Blood (OCI-LY7) 21845607
chr19 6535817 6536706 TCF7L2 GTRD no Colon (HCT116) 21845608
chr19 6535820 6536784 ZNF274 GTRD no Cervix (HeLa-S3) 21845609
chr19 6535847 6536880 ZNF274 GTRD no Cervix (HeLa-S3) 21845610
chr19 6535907 6537126 TCF7L2 GTRD no Colon (HCT116) 21845611
chr19 6535948 6536915 TCF7L2 GTRD no Colon (HCT116) 21845612
chr19 6536171 6536695 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21845629
chr19 6536647 6536662 TFAP2C JASPAR yes 112273832
Genes associated with rs348390[chr19:6536662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More