EnhancerDB
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  3. rs34908288[chr1:236082534]
Enhancers that have rs34908288[chr1:236082534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
chr1 236082498 236082788 vista5727
VISTA
Transcript factors that have rs34908288[chr1:236082534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236082478 236082939 ZNF274 GTRD no Bone Marrow (K562) 107886247
chr1 236082524 236082539 HSF1 JASPAR yes 36387962
chr1 236082524 236082539 HSF1 JASPAR yes 118489830
chr1 236082530 236082541 TFAP2A JASPAR yes 36387963
chr1 236082530 236082541 TFAP2B JASPAR yes 36387964
chr1 236082530 236082541 TFAP2A JASPAR yes 118489831
chr1 236082530 236082541 TFAP2B JASPAR yes 118489832
chr1 236082530 236082543 TFAP2B JASPAR yes 36387965
chr1 236082530 236082543 TFAP2B JASPAR yes 118489833
Genes associated with rs34908288[chr1:236082534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More