EnhancerDB
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  3. rs35628723[chr12:54192657]
Enhancers that have rs35628723[chr12:54192657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54186005 54202829 enh80200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs35628723[chr12:54192657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54191117 54192824 ZNF274 GTRD no Cervix (HeLa-S3) 21549717
chr12 54192235 54192851 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549765
chr12 54192284 54192828 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549766
chr12 54192315 54192705 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549767
chr12 54192353 54192693 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549769
chr12 54192358 54192748 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549770
chr12 54192361 54192661 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549771
chr12 54192378 54192714 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549773
chr12 54192382 54192672 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549774
chr12 54192387 54192667 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549775
chr12 54192416 54192692 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549776
chr12 54192423 54192713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549777
chr12 54192424 54192688 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549778
chr12 54192442 54192718 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549780
chr12 54192469 54192709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549781
chr12 54192472 54192701 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549782
chr12 54192503 54192809 ZNF143 GTRD no Epithelial (MCF-7) 21549783
chr12 54192513 54192829 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549784
chr12 54192644 54192659 SCRT1 JASPAR yes 121009040
chr12 54192646 54192659 SCRT2 JASPAR yes 121009048
chr12 54192657 54192671 ZIC1 JASPAR yes 121009051
Genes associated with rs35628723[chr12:54192657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53200333 53208335 - KRT4 ENSG00000170477.8 53208335 984322 Pancreas 0.0959577 12102
chr12 53290977 53343738 - KRT8 ENSG00000170421.7 53343738 848919 Breast 0.0531141 12105
chr12 54410715 54449813 + HOXC4 ENSG00000198353.6 54410715 218058 Spleen 0.451793 12141
chr12 53900474 53901422 - NPFF ENSG00000139574.7 53901422 291235 Adrenal 0.305535 12129