EnhancerDB
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  3. rs35729090[chr1:201490544]
Enhancers that have rs35729090[chr1:201490544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201476865 201492055 enh12521
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs35729090[chr1:201490544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201490126 201490852 ZNF143 GTRD no Epithelial (MCF-7) 21364485
chr1 201490132 201490882 ZNF143 GTRD no Epithelial (MCF-7) 21364486
chr1 201490523 201490544 IRF1 JASPAR yes 34501384
chr1 201490527 201490548 IRF1 JASPAR yes 34501386
chr1 201490529 201490550 IRF1 JASPAR yes 34501387
chr1 201490533 201490554 IRF1 JASPAR yes 34501388
chr1 201490534 201490555 IRF1 JASPAR yes 34501389
chr1 201490535 201490550 PRDM1 JASPAR yes 34501390
chr1 201490535 201490550 STAT2 JASPAR yes 34501391
chr1 201490536 201490550 SPIC JASPAR yes 34501392
chr1 201490536 201490550 STAT1 JASPAR yes 34501393
chr1 201490537 201490551 SPIC JASPAR yes 34501394
chr1 201490538 201490559 IRF1 JASPAR yes 34501395
chr1 201490539 201490560 IRF1 JASPAR yes 34501396
chr1 201490540 201490545 ETS2 TRANSFAC yes 34501397
chr1 201490540 201490561 IRF1 JASPAR yes 34501398
chr1 201490541 201490562 IRF1 JASPAR yes 34501399
chr1 201490542 201490557 FOXP1 JASPAR yes 34501400
chr1 201490542 201490563 IRF1 JASPAR yes 34501401
chr1 201490543 201490558 FOXP1 JASPAR yes 34501402
chr1 201490543 201490564 IRF1 JASPAR yes 34501403
chr1 201490544 201490559 FOXP1 JASPAR yes 34501404
chr1 201490544 201490565 IRF1 JASPAR yes 34501405
Genes associated with rs35729090[chr1:201490544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More