-
Home
- SNP
- rs368286679[chr1:180250898]
Enhancers that have rs368286679[chr1:180250898]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
180250812 |
180250948 |
vista4071 |
|
|
Transcript factors that have rs368286679[chr1:180250898]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
180250176
|
180251321
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107847783
|
|
|
chr1
|
180250644
|
180251509
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107847786
|
|
|
chr1
|
180250818
|
180253564
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107847787
|
|
|
chr1
|
180250818
|
180253564
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107847788
|
|
|
chr1
|
180250833
|
180251487
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107847789
|
|
|
chr1
|
180250849
|
180251207
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107847790
|
|
|
chr1
|
180250862
|
180251501
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107847791
|
|
|
chr1
|
180250889
|
180250900
|
E2F6
|
JASPAR
|
yes
|
|
118406830
|
|
|
chr1
|
180250892
|
180250913
|
IRF1
|
JASPAR
|
yes
|
|
118406831
|
|
Genes associated with rs368286679[chr1:180250898], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |