EnhancerDB
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  3. rs3738620[chr1:235095772]
Enhancers that have rs3738620[chr1:235095772]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3738620[chr1:235095772]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235095722 235096456 ZNF274 GTRD no Liver (HepG2) 21401463
chr1 235095742 235096357 ZNF274 GTRD no Liver (HepG2) 21401464
chr1 235095754 235095774 RREB1 JASPAR yes 36334889
chr1 235095766 235095772 SP1 TRANSFAC yes 36334891
chr1 235095767 235095788 ZNF263 JASPAR yes 36334892
chr1 235095769 235096457 ZNF274 GTRD no Liver (HepG2) 21401465
Genes associated with rs3738620[chr1:235095772], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More