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- rs374401882[chr19:6023417]
Enhancers that have rs374401882[chr19:6023417]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
6023211 |
6023679 |
vista28409 |
|
|
Transcript factors that have rs374401882[chr19:6023417]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
6021191
|
6023718
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108376338
|
|
|
chr19
|
6021251
|
6023452
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108376339
|
|
|
chr19
|
6021390
|
6023502
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108376340
|
|
|
chr19
|
6021810
|
6023498
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21844080
|
|
|
chr19
|
6021810
|
6023498
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376341
|
|
|
chr19
|
6022013
|
6023457
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108376343
|
|
|
chr19
|
6022038
|
6023420
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21844081
|
|
|
chr19
|
6022038
|
6023420
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376346
|
|
|
chr19
|
6022410
|
6023506
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108376348
|
|
|
chr19
|
6022893
|
6023478
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108376350
|
|
|
chr19
|
6022916
|
6023738
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376351
|
|
|
chr19
|
6022918
|
6023468
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376352
|
|
|
chr19
|
6023003
|
6023651
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376353
|
|
|
chr19
|
6023003
|
6023792
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376354
|
|
|
chr19
|
6023039
|
6023468
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376355
|
|
|
chr19
|
6023075
|
6023603
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376357
|
|
|
chr19
|
6023079
|
6023618
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108376358
|
|
|
chr19
|
6023081
|
6023849
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376359
|
|
|
chr19
|
6023084
|
6023535
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376360
|
|
|
chr19
|
6023132
|
6023707
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376361
|
|
|
chr19
|
6023135
|
6023507
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108376362
|
|
|
chr19
|
6023159
|
6023609
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108376363
|
|
|
chr19
|
6023163
|
6023802
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376364
|
|
|
chr19
|
6023187
|
6023652
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108376365
|
|
|
chr19
|
6023194
|
6023857
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376366
|
|
|
chr19
|
6023204
|
6023958
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108376367
|
|
|
chr19
|
6023212
|
6023783
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376368
|
|
|
chr19
|
6023244
|
6023819
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108376369
|
|
|
chr19
|
6023287
|
6023551
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108376370
|
|
|
chr19
|
6023356
|
6023556
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108376371
|
|
|
chr19
|
6023407
|
6023418
|
ESRRA
|
JASPAR
|
yes
|
|
70793104
|
|
|
chr19
|
6023408
|
6023426
|
ESR2
|
JASPAR
|
yes
|
|
70793105
|
|
|
chr19
|
6023409
|
6023423
|
XBP1
|
JASPAR
|
yes
|
|
70793106
|
|
|
chr19
|
6023410
|
6023424
|
CREB3
|
JASPAR
|
yes
|
|
70793107
|
|
|
chr19
|
6023414
|
6023426
|
CREB1
|
JASPAR
|
yes
|
|
70793109
|
|
|
chr19
|
6023415
|
6023420
|
ATF1
|
TRANSFAC
|
yes
|
|
70793110
|
|
Genes associated with rs374401882[chr19:6023417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |