-
Home
- SNP
- rs376217390[chr17:39782116]
Enhancers that have rs376217390[chr17:39782116]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
39782029 |
39782271 |
vista24789 |
|
|
Transcript factors that have rs376217390[chr17:39782116]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
39780561
|
39783418
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108259157
|
|
|
chr17
|
39780704
|
39782824
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108259158
|
|
|
chr17
|
39781307
|
39782118
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108259160
|
|
|
chr17
|
39781816
|
39782280
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108259165
|
|
|
chr17
|
39781836
|
39782232
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108259166
|
|
|
chr17
|
39781907
|
39782165
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108259167
|
|
|
chr17
|
39782007
|
39783355
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108259168
|
|
|
chr17
|
39782016
|
39783643
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108259169
|
|
|
chr17
|
39782021
|
39783503
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108259170
|
|
|
chr17
|
39782044
|
39783049
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108259171
|
|
|
chr17
|
39782044
|
39783286
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108259172
|
|
|
chr17
|
39782096
|
39782116
|
RREB1
|
JASPAR
|
yes
|
|
21238687
|
|
|
chr17
|
39782098
|
39782118
|
RREB1
|
JASPAR
|
yes
|
|
21238691
|
|
|
chr17
|
39782100
|
39782120
|
RREB1
|
JASPAR
|
yes
|
|
21238692
|
|
Genes associated with rs376217390[chr17:39782116], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |