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- rs3785562[chr17:62136229]
Enhancers that have rs3785562[chr17:62136229]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
62132205 |
62140819 |
enh62639 |
|
|
Transcript factors that have rs3785562[chr17:62136229]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
62135185
|
62138817
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108282053
|
|
|
chr17
|
62135396
|
62138804
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108282054
|
|
|
chr17
|
62136227
|
62136243
|
ZNF143
|
JASPAR
|
yes
|
|
55273113
|
|
Genes associated with rs3785562[chr17:62136229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
63133549
|
63223821
|
+
|
RGS9
|
ENSG00000108370.11
|
63133549
|
997320
|
Stomach
|
0.303111
|
16166
|
|
|
chr17
|
61850963
|
61896677
|
+
|
DDX42
|
ENSG00000198231.8
|
61850963
|
239552
|
Adrenal
|
0.209882
|
16144
|
|