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- rs3786990[chr19:3603928]
Enhancers that have rs3786990[chr19:3603928]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3601445 |
3605595 |
enh17867 |
|
|
Transcript factors that have rs3786990[chr19:3603928]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3602991
|
3604065
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367937
|
|
|
chr19
|
3602991
|
3604065
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367938
|
|
|
chr19
|
3603035
|
3604197
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367941
|
|
|
chr19
|
3603035
|
3604197
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367942
|
|
|
chr19
|
3603049
|
3604463
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367943
|
|
|
chr19
|
3603049
|
3604463
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108367944
|
|
|
chr19
|
3603058
|
3604143
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367945
|
|
|
chr19
|
3603058
|
3604143
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367946
|
|
|
chr19
|
3603076
|
3603987
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367947
|
|
|
chr19
|
3603076
|
3603987
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367948
|
|
|
chr19
|
3603101
|
3604053
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367951
|
|
|
chr19
|
3603101
|
3604053
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367952
|
|
|
chr19
|
3603107
|
3603965
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367953
|
|
|
chr19
|
3603107
|
3603965
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108367954
|
|
|
chr19
|
3603113
|
3603989
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367957
|
|
|
chr19
|
3603113
|
3603989
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367958
|
|
|
chr19
|
3603141
|
3604061
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108367961
|
|
|
chr19
|
3603141
|
3604061
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108367962
|
|
|
chr19
|
3603228
|
3603977
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108367971
|
|
|
chr19
|
3603228
|
3603977
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108367972
|
|
|
chr19
|
3603249
|
3604046
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367973
|
|
|
chr19
|
3603249
|
3604046
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367974
|
|
|
chr19
|
3603275
|
3603964
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367976
|
|
|
chr19
|
3603275
|
3603964
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367977
|
|
|
chr19
|
3603380
|
3604410
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108367982
|
|
|
chr19
|
3603405
|
3604029
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367983
|
|
|
chr19
|
3603407
|
3604425
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108367984
|
|
|
chr19
|
3603430
|
3604182
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108367985
|
|
|
chr19
|
3603438
|
3603949
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108367986
|
|
|
chr19
|
3603463
|
3603967
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367987
|
|
|
chr19
|
3603504
|
3604356
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367988
|
|
|
chr19
|
3603522
|
3604206
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108367990
|
|
|
chr19
|
3603526
|
3603994
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367991
|
|
|
chr19
|
3603531
|
3604258
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367992
|
|
|
chr19
|
3603539
|
3604077
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108367993
|
|
|
chr19
|
3603540
|
3603961
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367994
|
|
|
chr19
|
3603924
|
3603928
|
LFA1
|
TRANSFAC
|
yes
|
|
112141495
|
|
Genes associated with rs3786990[chr19:3603928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
4007644
|
4039384
|
+
|
PIAS4
|
ENSG00000105229.2
|
4007644
|
403716
|
Adrenal
|
0.329245
|
16826
|
|