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- rs3794673[chr16:87872009]
Enhancers that have rs3794673[chr16:87872009]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
87867457 |
87872091 |
enh115621 |
|
|
Transcript factors that have rs3794673[chr16:87872009]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
87864089
|
87872126
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221009
|
|
|
chr16
|
87864121
|
87872147
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221010
|
|
|
chr16
|
87864143
|
87872019
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221011
|
|
|
chr16
|
87866644
|
87872024
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221012
|
|
|
chr16
|
87869024
|
87872133
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108221017
|
|
|
chr16
|
87869853
|
87872637
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221019
|
|
|
chr16
|
87869942
|
87872253
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221020
|
|
|
chr16
|
87870093
|
87872248
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221023
|
|
|
chr16
|
87870112
|
87872127
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108221024
|
|
|
chr16
|
87870127
|
87872112
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221026
|
|
|
chr16
|
87870165
|
87872024
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221029
|
|
|
chr16
|
87870168
|
87872016
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221030
|
|
|
chr16
|
87870205
|
87872071
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108221036
|
|
|
chr16
|
87870217
|
87872016
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108221039
|
|
|
chr16
|
87870230
|
87872103
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221045
|
|
|
chr16
|
87870317
|
87872020
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221068
|
|
|
chr16
|
87870542
|
87872037
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108221106
|
|
|
chr16
|
87870543
|
87872064
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108221107
|
|
|
chr16
|
87870650
|
87872314
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221116
|
|
|
chr16
|
87870704
|
87872609
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221138
|
|
|
chr16
|
87870715
|
87872913
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221143
|
|
|
chr16
|
87870806
|
87872030
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108221160
|
|
|
chr16
|
87870965
|
87872246
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108221164
|
|
|
chr16
|
87871010
|
87872283
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108221166
|
|
|
chr16
|
87871042
|
87872040
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108221168
|
|
|
chr16
|
87871059
|
87872092
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221169
|
|
|
chr16
|
87871064
|
87872012
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108221170
|
|
|
chr16
|
87871101
|
87872027
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221172
|
|
|
chr16
|
87871109
|
87872014
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221173
|
|
|
chr16
|
87871112
|
87872255
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108221174
|
|
|
chr16
|
87872007
|
87872022
|
NR2C2
|
JASPAR
|
yes
|
|
12245740
|
|
Genes associated with rs3794673[chr16:87872009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
87417601
|
87438385
|
+
|
MAP1LC3B
|
ENSG00000140941.8
|
87417601
|
433624
|
Stomach
|
0.333018
|
15144
|
|