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- rs3825084[chr12:53593931]
Enhancers that have rs3825084[chr12:53593931]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
53589565 |
53597655 |
enh2363 |
|
|
Transcript factors that have rs3825084[chr12:53593931]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
53593925
|
53593935
|
MAX
|
JASPAR
|
yes
|
|
120976569
|
|
|
chr12
|
53593929
|
53593938
|
HIC2
|
JASPAR
|
yes
|
|
120976570
|
|
|
chr12
|
53593929
|
53593941
|
GLI2
|
JASPAR
|
yes
|
|
120976571
|
|
Genes associated with rs3825084[chr12:53593931], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
53689075
|
53693234
|
+
|
PFDN5
|
ENSG00000123349.9
|
53689075
|
95144
|
Esophagus
|
0.353375
|
12118
|
|
|
chr12
|
53574484
|
53584596
|
+
|
ZNF740
|
ENSG00000139651.9
|
53574484
|
9335
|
Spleen
|
2.43367e-06
|
12113
|
|