EnhancerDB
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Enhancers that have rs389898[chr19:6580366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs389898[chr19:6580366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378578
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378579
chr19 6579381 6581351 ZNF274 GTRD no Blood (GM12878) 108378735
chr19 6579404 6581052 ZNF274 GTRD no Blood (GM12878) 108378737
chr19 6579409 6581234 ZNF274 GTRD no Blood (GM12878) 108378739
chr19 6579424 6580584 ZNF274 GTRD no Blood (GM12878) 108378740
chr19 6579429 6580640 ZNF274 GTRD no Blood (GM12878) 108378741
chr19 6579442 6580529 ZNF274 GTRD no Blood (GM12878) 108378742
chr19 6579539 6580975 ZNF274 GTRD no Cervix (HeLa-S3) 21845875
chr19 6579539 6580975 ZNF274 GTRD no Cervix (HeLa-S3) 108378744
chr19 6579717 6580860 ZNF274 GTRD no Cervix (HeLa-S3) 21845876
chr19 6579717 6580860 ZNF274 GTRD no Cervix (HeLa-S3) 108378748
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 21845878
chr19 6579856 6581211 TCF7L2 GTRD no Colon (HCT116) 108378752
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 21845880
chr19 6579877 6581289 TCF7L2 GTRD no Colon (HCT116) 108378754
chr19 6579981 6580545 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108378758
chr19 6580030 6581163 TCF7L2 GTRD no Colon (HCT116) 21845881
chr19 6580040 6581021 ZNF274 GTRD no Cervix (HeLa-S3) 21845882
chr19 6580149 6580940 ZNF274 GTRD no Bone Marrow (K562) 21845883
chr19 6580181 6580809 ZNF274 GTRD no Bone Marrow (K562) 21845884
chr19 6580213 6580741 ZNF274 GTRD no Bone Marrow (K562) 21845885
chr19 6580216 6580842 ZNF274 GTRD no Bone Marrow (K562) 21845886
chr19 6580219 6580749 ZNF274 GTRD no Bone Marrow (K562) 21845887
chr19 6580236 6580615 ZNF274 GTRD no Cervix (HeLa-S3) 21845888
chr19 6580237 6580706 ZNF274 GTRD no Bone Marrow (K562) 21845889
chr19 6580242 6580742 ZNF274 GTRD no Cervix (HeLa-S3) 21845890
chr19 6580242 6580798 ZNF274 GTRD no Bone Marrow (K562) 21845891
chr19 6580247 6580841 ZNF274 GTRD no Cervix (HeLa-S3) 21845892
chr19 6580247 6580867 ZNF274 GTRD no Bone Marrow (K562) 21845893
chr19 6580249 6580650 ZNF274 GTRD no Cervix (HeLa-S3) 21845894
chr19 6580249 6580808 ZNF274 GTRD no Bone Marrow (K562) 21845895
chr19 6580249 6580846 ZNF274 GTRD no Bone Marrow (K562) 21845896
chr19 6580250 6580726 ZNF274 GTRD no Cervix (HeLa-S3) 21845897
chr19 6580255 6580704 ZNF274 GTRD no Bone Marrow (K562) 21845898
chr19 6580256 6580720 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21845899
chr19 6580263 6580637 TCF7L2 GTRD no Colon (HCT116) 21845900
chr19 6580264 6580839 TCF7L2 GTRD no Colon (HCT116) 21845901
chr19 6580277 6580728 ZNF274 GTRD no Bone Marrow (K562) 21845902
chr19 6580295 6580927 TCF7L2 GTRD no Colon (HCT116) 21845903
chr19 6580302 6580701 ZNF274 GTRD no Bone Marrow (K562) 21845904
chr19 6580303 6580699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845905
chr19 6580316 6580702 ZNF274 GTRD no Cervix (HeLa-S3) 21845906
chr19 6580318 6580714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845907
chr19 6580318 6580715 ZNF274 GTRD no Cervix (HeLa-S3) 21845908
chr19 6580320 6580776 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21845909
chr19 6580329 6580804 ZNF274 GTRD no Bone Marrow (K562) 21845910
chr19 6580334 6580710 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21845911
chr19 6580334 6580840 ZNF274 GTRD no Cervix (HeLa-S3) 21845912
chr19 6580343 6580838 ZNF274 GTRD no Cervix (HeLa-S3) 21845913
chr19 6580357 6580366 THAP1 JASPAR yes 112278174
chr19 6580357 6580373 ZNF143 JASPAR yes 112278175
chr19 6580359 6580699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845914
Genes associated with rs389898[chr19:6580366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More